I will agree with your first paragraph. It really does feel like it's trying to force too much info down our throats. Although I suspect I get that feeling only because of how the information is conveyed, namely YAK YAKKITY YAK YAK YAK.

About the second point, true but it's a bit nitpicky for me, so I dont have issues with that. Certain things have to sacrificed to tell a story like this.

Third point will fly past most people. I realized it but didn't give it much thought because the movie completely sidesteps the issue. You are right, but the movie is bad not because of this.
The Matrix went all dumb action in the last act, but at least it was some damn cool action.