looks ok to me..

one question though... kansai thru pass 3-days can use from 8th till 11th ?

Hi
But this just RM11 per day, which is RM110 to 10 days
Rm200 is refundable deposit

Hi
I got it from another company
travelrecommends.com

and using voucher (pm if u need voucher)

2550yen not cheap...

last train from kansai airport to kyoto is 11.09pm, u can definitely make it. immigration there very fast provided u fill ur custom declaration form correctly on flight so u dun waste time

edit: my bad, its to osaka and then u transfer to special rapid service, total cost 1880yen till kyoto. straight to kyoto is 10.16pm, if u can run u can definitely make it

Guys, need a clarification on hotel charges.My friend told me that staying in a hotel, we will be charged per person instead of room.But, googling shows charges are based on room.But Im not sure from google there, as an example RM300 is actually the price of a room or referring to per person?

Sry, I dont used any Data when I traveling. I still using old school way which is paper map.
Btw, I got own HP number at Japan, Those travel data package are not my kind of stuff to study it.
Tokyo midnight train also called "Drunker Train" or '' Hell Train'' 
People will vomit , pee , shit inside train.  I not kidding.  I see too much until used to it already. Most of people won't take 11:30 onward train.
some so drunk until take off all their clothes and lie on floor of train.
You got Baby, if your baby make any noise inside train during this hour, sure kena fxxx by those drunker up side down.

You have to calculate the risk

Might wanna check out each location on the map to reduce transport time and maximize jalan-jalan time.

no extra pay needed to nara, himeji, kobe, and osaka if u take normal slower train. limited express have to pay extra if its nankai and kintetsu, cant confirm hanshin/sanyo but from my understand its no need

Yes Normal Train, but Express Type. It will stop at Big Station only.
Normal Train which similar like our KTM Commuter. Buy Train ticket and board the train. Find any empty seat, If seat all full, you need standing all the way.

Another one was Limited Express Train, Traveler speed normally at 120km/h while normal train just 60km/h. Stop at Major Station only.

[[Because the Limited Express train didn't stop at Kintetsunara Station, So you have to get down at Yamat Osaidai Station first. thne change to normal train / normal train "Express" to Kintetsunara Station]]

Limited Express normally have 4 Coach, 1 1st Class , 2 Reserve Seat Coach, 1 Non Reserve Seat Coach. (JR Train)
If you buy Train Ticket only, you can board the Train but only limited at non reserve seat coach. If coach seat is full, you need standing all the way. Even you found seat, as long you leave your seat, someone will take over it.

Kansai Thru Pass not covered Kintetsu Limited Express. You have to top up money for train ticket and reserve seat.
Kintetsu limited express require all passenger must buy reserve seat ticket.

As per your plan, is it enough to just spend few hours in Nara, Himeji, Kobe?

Your day 1 trip is very pack.
In Kyoto where are you planning to visit.?
AND from Nara to Himeji and kobe is like 1 end to another end.

sunday morning is no car day for akiba and there's an otaku free market next to mcdonald there where people go n sell their figurines n stuff. often go there for great deal