Science Anyone here familiar with Mr Bayes (Bioinfo)?, Running Mr Bayes on Nvidia GPU
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 Apr 26 2012, 07:37 PM
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#1
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Junior Member
107 posts Joined: Sep 2008  
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what kind of trouble are you facing, compiling it ,or it doesnt seems to work? have you try this?
http://sourceforge.net/projects/mrbayes-gp...latest/download |
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Apr 29 2012, 07:37 PM
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#2
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Junior Member
107 posts Joined: Sep 2008
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on which platform are you running it on? i guess beagle is still buggy,depending on cards model, been using the mpi version for quite awhile...using 64 cores...pretty much do the job.
anyway . anyway here is a good article to share regarding comparative models http://sysbio.oxfordjournals.org/content/60/5/685 This post has been edited by herofire86: Apr 29 2012, 08:03 PM |
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Apr 30 2012, 11:19 AM
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#3
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Junior Member
107 posts Joined: Sep 2008
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QUOTE(PF T.J. @ Apr 29 2012, 10:50 PM) Running on Windows 7 (64-bit)? owh , tweaking it under windows 7 may have some limitation, to play around with the sourcecode and library, unix/linux based platform have more freedom to do so. I don't think my GPU is supported... I've tried F@H with my GPU before and its a hell lot faster than my CPU, which is why its quite weird for it to not perform similarly on Mr. Bayes  If GPU works faster and better, that'll affect the choices of laptops/ workstations we choose later on.. And thanks alot for the article  I'd probably need some time to digest the info there I'm a little bit outdated in the phylogenetic programs used, especially those pertaining to ML lol  yup , gpu now seems to be still understandardised, ,if only we can work on a universal interpreter, that can act as emulator to every comp that equipped with gpu, not just for specific software or hardware. kinda like javavm, |
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May 8 2012, 08:04 PM
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#4
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Junior Member
107 posts Joined: Sep 2008
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QUOTE(PF T.J. @ May 1 2012, 12:01 AM) Too deep already bro, I don't understand haha~ Are you a programmer? You seemed to know quite a lot haha I'm just an end-user   |
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