Now this sucks... I'm able to beat any class (there are a few hard one but it's still possible) 1 on 1 but a Hunter is near to impossible for me...

Usually when the duel starts I go into stealth, the Hunter will flare and set up traps around him, making me impossible to attack. This makes approaching a bit hard but still possible, I sprinted to him and opened with Cheap Shot -> Multilate til 4/5 CP -> Kidney Shot.

Now here's the tricky part, usually the Hunter will trinket out of my Kidney Shot and Nitro Boost away (my Sprint is used to approach) and summon bunch of snakes with his pet attacking me, causing a lot of slows/stuns. Now I'd trinket this but I'm kinda stuck at this part, what I can imagine doing is to approach the hunter and disarm him and aim for another Kidney Shot but I've already used up my Sprint, there's no other method to get near already and his pet with snakes will slow me down, Preparation is not worth mentioning here since it has 10 minutes CD, which wasn't even on for most of the time.

Worst come to worst, Rogue's strategy revolves around re-stealth which won't work with Mark of the Hunter...... crap.

The only chance I'd see is not to approach with Sprint and wait for the Hunter to get bored and come out from his heavily guarded castle... which will be a test of patience 

i thin u betta ask quaza

coz he can™

Hunters got their own problem also...

I am not familiar with rogue skill, but I got a hunter myself...

So just to let you know the desperate situation of hunter:
1, being disarm = no deterance, no attack
2, pet is dead = no master call, no ROS, and pet dies easily
3, too close = no arrow shooting.. = no skills can be use (except some crappy melee skill and wing clip or disengage)

So it's up to you on how you make these happen.

Hunter mark can be dispell with cloak, or vanish.
And I remember i read somewhere about this:
I remember i read somewhere that says if enemy (whoever, not limited to hunter) does not trinket to CS, then use the CP on damage skill. Not sure how true it is or how well would it work.